2014-现在 北京大学BIOPIC研究员，及化学与分子工程学院兼职副教授

2010-2014 北京大学BIOPIC副研究员，及化学与分子工程学院兼职副教授

2005-2010， 美国宾大肌肉研究所及纳米/生物交叉研究中心，博士后及Senior Research Investigator

2005，University of Pittsburgh，理学博士

1999，中国科学技术大学，理学硕士

1996，中国科学技术大学，理学学士

单分子技术已成为研究生命科学的重要手段，其终极目标之一就是在体内实时观测单分子包括生物大分子的运动,并以此在分子水平上理解生理条件下的细胞过程。我们单分子及活细胞超高分辨率成像实验室的主要方向就是开创、发展和应用新的和现有的单分子技术，包括发展超高分辨率单分子荧光成像技术和单分子操作及力学测量技术，以在单分子水平上研究活细胞，如癌细胞和干细胞的基因表达和调控，进而推动癌症治疗和干细胞研究应用。运用超分辨成像和活细胞成像，我们将与其他BIOPIC的PI合作推进以下几个方向的研究：（1）真核细胞如何利用和控制其基因转录和翻译过程中的内在以及外部噪音；（2）解析染色质的结构，分布及其在基因转录中构型改变的动力学过程。（3）最终理解细胞基因表达中脉冲过程产生和调控的机理，并用于癌症细胞以及干细胞分化机理的研究。

2017，拜尔学者奖

2014，通化东宝生命科学奖教金

2012，SCOPUS 青年科学家生命科学银奖

1. Spying on protein interactions in living cells with reconstituted scarlet light. Wang, S (Wang, Sheng); Ding, M (Ding, Miao); Xue, BX (Xue, Boxin); Hou, YP (Hou, Yingping); Sun, YJ (Sun, Yujie). ANALYST.  NOV 7 2018 143(21) 5161-5169.  DOI: 10.1039/c8an01223g
2. Lighting Up Live Cells with Smart Genetically Encoded Fluorescence Probes from GMars Family.  Wang, Sheng; Shuai, Yao; Sun, Chaoying; Xue, Boxin; Hou, Yingping; Su, Xiaodong; Sun, Yujie.  ACS sensors.  2018  DOI: 10.1021/acssensors.8b00449
3. Highly efficient cellular uptake of a cell-penetrating peptide (CPP) derived from the capsid protein of porcine circovirus type 2.  Yu, WT (Yu, Wanting); Zhan, Y (Zhan, Yang); Xue, BX (Xue, Boxin); Dong, YP (Dong, Yanpeng); Wang, YF (Wang, Yanfeng); Jiang, P (Jiang, Ping); Wang, AB (Wang, Aibing); Sun, YJ (Sun, Yujie); Yang, Y (Yang, Yi).  JOURNAL OF BIOLOGICAL CHEMISTRY.  2018 293(39)15221-15232.  DOI: 10.1074/jbc.RA118.004823
4. Expansion enhanced nanoscopy. Li, Rongqin; Chen, Xuanze; Lin, Zixi; Wang, Yao; Sun, Yujie.  Nanoscale.  2018 10(37) 17552-17556.  DOI: 10.1039/c8nr04267e
5. Rtt105 functions as a chaperone for replication protein A to preserve genome stability.  Li, SQ (Li, Shuqi); Xu, ZY (Xu, Zhiyun); Xu, JW (Xu, Jiawei); Zuo, LY (Zuo, Linyu); Yu, CH (Yu, Chuanhe); Zheng, P (Zheng, Pu); Gan, HY (Gan, Haiyun); Wang, XZ (Wang, Xuezheng); Li, LT (Li, Longtu); Sharma, S (Sharma, Sushma); Chabes, A (Chabes, Andrei); Li, D (Li, Di); Wang, S (Wang, Sheng); Zheng, SH (Zheng, Sihao); Li, JB (Li, Jinbao); Chen, XF (Chen, Xuefeng); Sun, YJ (Sun, Yujie); Xu, DY (Xu, Dongyi); Han, JH (Han, Junhong); Chan, KM (Chan, Kuiming); Qi, Z (Qi, Zhi); Feng, JX (Feng, Jianxun); Li, Q (Li, Qing).  EMBO JOURNAL.  2018 37(17)e99154.  DOI: 10.15252/embj.201899154
6. Intranucleus Single-Molecule Imaging in Living Cells.  Shao, SP (Shao, Shipeng); Xue, BX (Xue, Boxin); Sun, YJ (Sun, Yujie).  BIOPHYSICAL JOURNAL.  2018 115(2) 181-189.  DOI: 10.1016/j.bpj.2018.05.017
7. GMars-T Enabling Multimodal Subdiffraction Structural and Functional Fluorescence Imaging in Live Cells.  Wang, S (Wang, Sheng); Chen, XZ (Chen, Xuanze); Chang, L (Chang, Lei); Ding, MA (Ding, Miao); Xue, RY (Xue, Ruiying); Duan, HF (Duan, Haifeng); Sun, YJ (Sun, Yujie).  ANALYTICAL CHEMISTRY.  2018 90(11) 6626-6634.  DOI: 10.1021/acs.analchem.8b00418
8. MapZ Forms a Stable Ring Structure That Acts As a Nanotrack for FtsZ Treadmilling in Streptococcus mutans.  Li, YL (Li, Yongliang); Shao, SP (Shao, Shipeng); Xu, X (Xu, Xiao); Su, XD (Su, Xiaodong); Sun, YJ (Sun, Yujie); Wei, SC (Wei, Shicheng).  ACS NANO.  2018  12(6) 6137-6146.  DOI: 10.1021/acsnano.8b02469
9. Live Cell Visualization of Multiple Protein-Protein Interactions with BiFC Rainbow.   Wang, S (Wang, Sheng); Ding, M (Ding, Miao); Xue, BX (Xue, Boxin); Hou, YP (Hou, Yingping); Sun, YJ (Sun, Yujie).  ACS CHEMICAL BIOLOGY.  2018  13(5)1180-1188.  DOI: 10.1021/acschembio.7b00931
10. Visualizing Autophagic Lysosome Reformation in Cells Using In Vitro Reconstitution Systems.  Chen, Yang; Su, Qian Peter; Sun, Yujie; Yu, Li.  Current protocols in cell biology.  2018  78(1)11.24.1-11.24.15.  2018  DOI: 10.1002/cpcb.44
11. Multiplexed sgRNA Expression Allows Versatile Single Nonrepetitive DNA Labeling and Endogenous Gene Regulation.  Shao, SP (Shao, Shipeng); Chang, L (Chang, Lei); Sun, Y (Sun, Yuao); Hou, YP (Hou, Yingping); Fan, XY (Fan, Xiaoying); Sun, YJ (Sun, Yujie).  ACS SYNTHETIC BIOLOGY.  2018  7(1) 176-186.  DOI: 10.1021/acssynbio.7b00268
12. Guan R, Zhang L, Su QP, Mickolajczyk KJ, Chen GY, Hancock WO, Sun Y, Zhao Y and Chen Z. Crystal structure of Zen4 in the apo state reveals a missing conformation of kinesin. Nat Commun. 2017;8:14951.
13. Wang S, Ding M, Chen X, Chang L and Sun Y. Development of bimolecular fluorescence complementation using rsEGFP2 for detection and super-resolution imaging of protein-protein interactions in live cells. Biomed Opt Express. 2017;8:3119-3131.
14. Shao S, Chang L, Hou Y and Sun Y. Illuminating the structure and dynamics of chromatin by fluorescence labeling. Frontiers in Biology. 2017;12:241-257.
15. Wang S, Ding M, Xue B, Hou Y and Sun Y. Live Cell Visualization of Multiple Protein–Protein Interactions with BiFC Rainbow. ACS Chemical Biology. 2017.
16. Hu H, Zhang H, Wang S, Ding M, An H, Hou Y, Yang X, Wei W, Sun Y and Tang C. Live visualization of genomic loci with BiFC-TALE. Sci Rep. 2017;7:40192.
17. Fang X, Chen X, Li R, Liu Z, Chen H, Sun Z, Ju B, Liu Y, Zhang S, Ding D, Sun Y and Wu C. Multicolor Photo‐Crosslinkable AIEgens toward Compact Nanodots for Subcellular Imaging and STED Nanoscopy. Small. 2017.
18. Chen X, Liu Z, Li R, Shan C, Zeng Z, Xue B, Yuan W, Mo C, Xi P, Wu C and Sun Y. Multicolor Super-resolution Fluorescence Microscopy with Blue and Carmine Small Photoblinking Polymer Dots. ACS Nano. 2017;11:8084-8091.
19. Shao S, Chang L, Sun Y, Hou Y, Fan X and Sun Y. Multiplexed sgRNA Expression Allows Versatile Single Non-repetitive DNA Labeling and Endogenous Gene Regulation. bioRxiv. 2017.
20. Chen X, Li R, Liu Z, Sun K, Sun Z, Chen D, Xu G, Xi P, Wu C and Sun Y. Small Photoblinking Semiconductor Polymer Dots for Fluorescence Nanoscopy. Adv Mater. 2017;29.
21. Han X, Li P, Yang Z, Huang X, Wei G, Sun Y, Kang X, Hu X, Deng Q, Chen L, He A, Huo Y, Li D, Betzig E and Luo J. Zyxin regulates endothelial von Willebrand factor secretion by reorganizing actin filaments around exocytic granules. Nat Commun. 2017;8:14639.
22. Xuanze Chen*, Rongqin Li*, Zhihe Liu*, Kai Sun, Zezhou Sun, Danni Chen, Gaixia Xu, Peng Xi, Changfeng Wu,* & Yujie Sun*, Photoblinking small semiconductor polymer dots for fluorescence nanoscopy, Adv Mater, 2016.
23. Sheng Wang*, Xuanze Chen*, Lei Chang*, Ruiying Xue, Haifeng Duan, and Yujie Sun，GMars-Q Enables Long-Term Live-Cell Parallelized Reversible Saturable Optical Fluorescence Transitions Nanoscopy，ACS Nano, 2016, 10:9136–9144
24. Xuanze Chen*, Zhiping Zeng*, Rongqin Li, Boxin Xue, Peng Xi*, and Yujie Sun*, Superior performance with sCMOS over EMCCD in Super-Resolution Optical Fluctuation Imaging (SOFI), J Biomed Optics, 2016, 6:066007
25. Xuanze Chen*, Weijian Zong,Rongqin Li, Zhiping Zeng, Jia Zhao, Peng Xi, Liangyi Chen and Yujie Sun, Two-photon light-sheet nanoscopy by fluorescence fluctuation correlation analysis, Nanoscale, 2016, 8:9982–9987.
26. Xuanze Chen*, Mian Wei*, M. Mocarlo Zheng*, Jiaxi Zhao, Huiwen Hao, Lei Chang, Peng Xi, and Yujie Sun, Study of RNA Polymerase II Clustering inside Live-Cell Nuclei Using Bayesian Nanoscopy, ACS Nano, 2016, 10:2447–54.
27. Wanqing Du*, Qian Peter Su*, Yang Chen*, Yueyao Zhu, Dong Jiang, Yueguang Rong, Senyan Zhang, Yixiao Zhang, He Ren, Chuanmao Zhang, Xinquan Wang, Ning Gao, Yanfeng Wang, Lingfei Sun, Yujie Sun* and Li Yu*, Kinesin 1 Drives Autolysosome Tubulation, Dev Cell, 2016, 37:326–336
28. Qian Peter Su*, Wanqing Du*, Qinghua Ji, Boxin Xue, Dong Jiang, Yueyao Zhu, Jizhong Lou, Li Yu*, and Yujie Sun*, Vesicle Size Regulates Nanotube Formation in the Cell, Sci Rep, 2016, 6:24002
29. Shipeng Shao, Weiwei Zhang, Huan Hu, Boxin Xue, Jinshan Qin, Chaoying Sun, Yuao Sun, Wensheng Wei, Yujie Sun, Long-term Dual-color Tracking of Genomic Loci by Modified sgRNAs of the CRISPR/Cas9 System, Nucleic Acids Res, 2016, 44:e86
30. Wanqing Du, Qian Peter Su, Yang Chen, Yueyao Zhu, Dong Jiang, Yueguang Rong, Senyan Zhang, Yixiao Zhang, He Ren, Chuanmao Zhang, Xinquan Wang, Ning Gao, Yanfeng Wang, Lingfei Sun, Yujie Sun* and Li Yu*, Dev Cell, 2016, 37, 326–336 (*co-corresponding)
31. Shipeng Shao, Weiwei Zhang, Huan Hu, Boxin Xue, Jinshan Qin, Chaoying Sun, Yuao Sun, Wensheng Wei, Yujie Sun, Long-term Dual-color Tracking of Genomic Loci by Modified sgRNAs of the CRISPR/Cas9 System, Nucleic Acids Res, 2016, Nucleic Acids Res., 2016, 44, e86.
32. Sun, Y. (2014). Super-resolution imaging with stochastic optical reconstruction microscopy (STORM) and photoactivated localization microscopy (PALM) in Optical Nanoscopy and Novel Microscopy Techniques, Xi, P., eds. (CRC Press)
33. Chong Wang · Wanqing Du · Qian Peter Su · Mingli Zhu · Peiyuan Feng · Ying Li · Yichen Zhou · Na Mi · Yueyao Zhu · Dong Jiang · Senyan Zhang · Zerui Zhang · Yujie Sun* · Li Yu*，Dynamic tubulation of mitochondria drives mitochondrial network formation，Cell Res. 2015 In press (*co-corresponding)
34. Weijian Zong, Jia Zhao, Xuanyang Chen, Yuan Lin, Huixia Ren, Yunfeng Zhang, Ming Fan, Zhuan Zhou, Heping Cheng, Yujie Sun* and Liangyi Chen*, Large-field high-resolution two-photon digital scanned light-sheet microscopy, Cell Res.,2014,5:1-4 (*co-corresponding)
35. Zhen Liu, Dong Xing, Qian Su, Xinyu Kong, Jiamei Zhang, Boxin Xue, Hao Sun, Sheng Wang, Yile Tao, Yujie Sun, Super-resolution Imaging and Tracking of Protein-Protein Interaction in Subdiffraction Cellular Space, Nature Comm. 2014,5:4443-4449
36. Sangjin Kim&, Erik Brostr?mer&, Dong Xing&, Jianshi Jin&, Shasha Chong, HaoGe, Siyuan Wang, Chan Gu, Lijiang Yang, Yi Qin Gao, Xiao-dong Su*, Yujie Sun*, X. SunneyXie*, Probing Allostery Through DNA. Science 2013, 339:816-819 (*co-corresponding)
37. Yujie Sun, Osamu Sato, Felix Ruhnow, Mark E. Arsenault, Mitsuo Ikebe, and Yale E. Goldman. Single Molecule Stepping and Structural Dynamics of Myosin X. Nat Struct Mol Biol 2010,17, 485-491 .
38. Yujie Sun, Jennine D. McKenna, John M. Murray, E. Michael Ostap and Yale E. Goldman. Parallax: High Accuracy Three-Dimensional Single Molecule Tracking Using Split Images. Nano Lett 2009, 9, 2676-2682.
39. Yujie Sun, Harry W. Schroeder III, John F. Beausang, Kazuaki Homma, Mitsuo Ikebe, and Yale E. Goldman. Myosin VI walks “wiggly” on actin with large and variable tilting. Mol Cell 2007, 28, 954-964.
40. Yujie Sun, Boris Akhremitchev, Gilbert C. Walker. Using the Adhesive Interaction between AFM tips and Polymer Surfaces to Measure the Elastic Modulus of Compliant Samples. Langmuir 2004, 20, 5837-5845.